Логика случая. О природе и происхождении биологической эволюции - Евгений Кунин

Drummond, D. A., and C. O. Wilke. (2009) The Evolutionary Consequences of Erroneous Protein Synthesis. Nat Rev Genet 10: 715–724.

Dupuy, C., E. Huguet, and J. M. Drezen. (2006) Unfolding the Evolutionary Story of Polydnaviruses. Virus Res 117: 81–89.

Echols, H. (1981) SOS Functions, Cancer, and Inducible Evolution. Cell 25: 1–2.

Eckerle, L. D., X. Lu, S. M. Sperry, L. Choi, and M. R. Denison. (2007) High Fidelity of Murine Hepatitis Virus Replication Is Decreased in nsp14 Exoribonuclease Mutants. J Virol 81: 12,135—12,144.

Eddy, S. R. (2002) Computational Genomics of Noncoding RNA Genes. Cell 109: 137–140.

Edwards, R. A., and F. Rohwer. (2005) Viral Metagenomics. Nat Rev Microbiol 3: 504–510.

Eigen, M. (1971) Self-organization of Matter and the Evolution of Biological Macromolecules. Naturwissenschaften 58: 465–523.

Eigen, M., B. F. Lindemann, M. Tietze, R. Winkler-Oswatitsch, A. Dress, and A. von Haeseler. (1989) How Old Is the Genetic Code? Statistical Geometry of tRNA Provides an Answer. Science 244: 673–679.

Eisen, J. A., J. F. Heidelberg, O. White, and S. L. Salzberg. (2000) Evidence for Symmetric Chromosomal Inversions Around the Replication Origin in Bacteria. Genome Biol 1: RESEARCH0011.

Eldredge, N., and S. J. Gould. (1997) On Punctuated Equilibria. Science 276: 338–341.

Ellington, A. D., X. Chen, M. Robertson, and A. Syrett. (2009) Evolutionary Origins and Directed Evolution of RNA. Int J Biochem Cell Biol 41: 254–265.

Ellis, R. J. (2003) Protein Folding: Importance of the Anfinsen Cage. Curr Biol 13: R881—883.

Embley, T. M., and W. Martin. (2006) Eukaryotic Evolution, Changes and Challenges. Nature 440: 623–630.

Esser, C., N. Ahmadinejad, C. Wiegand, C. Rotte, F. Sebastiani, G. Gelius-Dietrich, K. Henze, E. Kretschmann, E. Richly, D. Leister, D. Bryant, M. A. Steel, P. J. Lockhart, D. Penny, and W. Martin. (2004) A Genome Phylogeny for Mitochondria Among Alpha-Proteobacteria and a Predominantly Eubacterial Ancestry of Yeast Nuclear Genes. Mol Biol Evol 21: 1,643—1,660.

Esser, C., W. Martin, and T. Dagan. (2007) The Origin of Mitochondria in Light of a Fluid Prokaryotic Chromosome Model. Biol Lett 3: 180–184.

Falkowski, P. G., T. Fenchel, and E. F. Delong. (2008) The Microbial Engines That Drive Earth’s Biogeochemical Cycles. Science 320: 1,034—1,039.

Falnes, P. O. (2005) RNA Repair — the Latest Addition to the Toolbox for Macro-molecular Maintenance. RNA Biol 2: 14–16.

Fedor, M. J., and J. R. Williamson. (2005) The Catalytic Diversity of RNAs. Nat Rev Mol Cell Biol 6: 399–412.

Felsenstein, J. (1996) Inferring Phylogenies from Protein Sequences by Parsimony, Distance, and Likelihood Methods. Methods Enzymol 266: 418–427.

Felsenstein, J. (2004). Inferring Phylogenies. Sunderland, MA: Sinauer Associates.

Feschotte, C. (2010) Virology: Bornavirus Enters the Genome. Nature 463: 39–40.

Field, M. C., and J. B. Dacks. (2009) First and Last Ancestors: Reconstructing Evolution of the Endomembrane System with Escrts, Vesicle Coat Proteins, and Nuclear Pore Complexes. Curr Opin Cell Biol 21: 4—13.

Fields, B. N., P. M. Howley, D. E. Griffin, R. A. Lamb, M. A. Martin, B. Roizman, S. E. Straus, and D. M. Knipe. (2001). Fields Virology. New York: Lippincott Williams & Wilkins.

Fisher Box, J. (1978) R. A. Fisher: The Life of a Scientist. New York: Wiley.

Fisher, R. A. (1930) The Genetical Theory of Natural Selection. New York: Oxford University Press.

Fitch, W. M. (1970) Distinguishing Homologous from Analogous Proteins. Syst Zool 19: 99—113.

Fleischmann, R. D., M. D. Adams, O. White, R. A. Clayton, E. F. Kirkness, A. R. Kerlavage, C. J. Bult, J. F. Tomb, B. A. Dougherty, J. M. Merrick et al. (1995) Whole-Genome Random Sequencing and Assembly of Haemophilus Influenzae Rd [See Comments]. Science 269: 496–512.

Flores, R., S. Delgado, M. E. Gas, A. Carbonell, D. Molina, S. Gago, and M. De la Pena. (2004) Viroids: The Minimal Non-Coding RNAs with Autonomous Replication. FEBS Lett 567: 42–48.

Fontanari, J. F., M. Santos, and E. Szathmary. (2006) Coexistence and Error Propagation in Pre-Biotic Vesicle Models: A Group Selection Approach. J Theor Biol 239: 247–256.

Forterre, P. (1999) Displacement of Cellular Proteins by Functional Analogues from Plasmids or Viruses Could Explain Puzzling Phylogenies of Many DNA Informational Proteins. Mol Microbiol 33: 457–465.

Forterre, P. (2002) A Hot Story from Comparative Genomics: Reverse Gyrase Is the Only Hyperthermophile-Specific Protein. Trends Genet 18: 236–237.

Forterre, P. (2006) Three RNA Cells for Ribosomal Lineages and Three DNA Viruses to Replicate Their Genomes: A Hypothesis for the Origin of Cellular Domain. Proc Natl Acad Sci USA 103: 3,669—3,674.

Forterre, P., and D. Prangishvili. (2009) The Great Billion-Year War Between Ribosome — and Capsid-Encoding Organisms (Cells and Viruses) As the Major Source of Evolutionary Novelties. Ann N Y Acad Sci 1,178: 65–77.

Foster, P. L. (2000) Adaptive Mutation: Implications for Evolution. Bioessays 22: 1,067—1,074.

Foster, P. L. (2007) Stress-Induced Mutagenesis in Bacteria. Crit Rev Biochem Mol Biol 42: 373–397.

Fowles, J. (1969). The French Lieutenant’s Woman. Boston: Little & Brown.

Fox, S. W. (1976) The Evolutionary Significance of Phase-Separated Microsystems. Orig Life 7: 49–68.

Frank, A. C., H. Amiri, and S. G. Andersson. (2002) Genome Deterioration: Loss of Repeated Sequences and Accumulation of Junk DNA. Genetica 115: 1—12.

Fraser, C. M., J. D. Gocayne, O. White, M. D. Adams, R. A. Clayton, R. D. Fleischmann, C. J. Bult, A. R. Kerlavage, G. Sutton, J. M. Kelley, et al. (1995) The Minimal Gene Complement of Mycoplasma Genitalium. Science 270: 397–403.

Fredrick, K., and H. F. Noller. (2002) Accurate Translocation of mRNA by the Ribosome Requires a Peptidyl Group or Its Analog on the tRNA Moving into the 30s P-Site. Mol Cell 9: 1,125—1,131.

Freeland, S. J., and L. D. Hurst. (1998) The Genetic Code Is One in a Million. J Mol Evol 47: 238–248.